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 neurodegenerative disease



Speech-Based Depressive Mood Detection in the Presence of Multiple Sclerosis: A Cross-Corpus and Cross-Lingual Study

Gonzalez-Machorro, Monica, Reichel, Uwe, Hecker, Pascal, Hammer, Helly, Sagha, Hesam, Eyben, Florian, Hoepner, Robert, Schuller, Björn W.

arXiv.org Artificial Intelligence

Depression commonly co-occurs with neurodegenerative disorders like Multiple Sclerosis (MS), yet the potential of speech-based Artificial Intelligence for detecting depression in such contexts remains unexplored. This study examines the transferability of speech-based depression detection methods to people with MS (pwMS) through cross-corpus and cross-lingual analysis using English data from the general population and German data from pwMS. Our approach implements supervised machine learning models using: 1) conventional speech and language features commonly used in the field, 2) emotional dimensions derived from a Speech Emotion Recognition (SER) model, and 3) exploratory speech feature analysis. Despite limited data, our models detect depressive mood in pwMS with moderate generalisability, achieving a 66% Unweighted Average Recall (UAR) on a binary task. Feature selection further improved performance, boosting UAR to 74%. Our findings also highlight the relevant role emotional changes have as an indicator of depressive mood in both the general population and within PwMS. This study provides an initial exploration into generalising speech-based depression detection, even in the presence of co-occurring conditions, such as neurodegenerative diseases.



Smart microscope captures aggregation of misfolded proteins

AIHub

EPFL researchers have developed a microscope that can be used to predict the onset of misfolded protein aggregation – a hallmark of neurodegenerative disease – as well as analyze the biomechanical properties of these aggregates. The accumulation of misfolded proteins in the brain is central to the progression of neurodegenerative diseases like Huntington's, Alzheimer's and Parkinson's. But to the human eye, proteins that are destined to form harmful aggregates don't look any different than normal proteins. The formation of such aggregates also tends to happen randomly and relatively rapidly – on the scale of minutes. The ability to identify and characterize protein aggregates is essential for understanding and fighting neurodegenerative diseases.


Alzheimer's Disease Classification Using Retinal OCT: TransnetOCT and Swin Transformer Models

Kesu, Siva Manohar Reddy, Sinha, Neelam, Ramasangu, Hariharan, Issac, Thomas Gregor

arXiv.org Artificial Intelligence

Retinal optical coherence tomography (OCT) images are the biomarkers for neurodegenerative diseases, which are rising in prevalence. Early detection of Alzheimer's disease using retinal OCT is a primary challenging task. This work utilizes advanced deep learning techniques to classify retinal OCT images of subjects with Alzheimer's disease (AD) and healthy controls (CO). The goal is to enhance diagnostic capabilities through efficient image analysis. In the proposed model, Raw OCT images have been preprocessed with ImageJ and given to various deep-learning models to evaluate the accuracy. The best classification architecture is TransNetOCT, which has an average accuracy of 98.18% for input OCT images and 98.91% for segmented OCT images for five-fold cross-validation compared to other models, and the Swin Transformer model has achieved an accuracy of 93.54%. The evaluation accuracy metric demonstrated TransNetOCT and Swin transformer models capability to classify AD and CO subjects reliably, contributing to the potential for improved diagnostic processes in clinical settings.


Towards an AI co-scientist

Gottweis, Juraj, Weng, Wei-Hung, Daryin, Alexander, Tu, Tao, Palepu, Anil, Sirkovic, Petar, Myaskovsky, Artiom, Weissenberger, Felix, Rong, Keran, Tanno, Ryutaro, Saab, Khaled, Popovici, Dan, Blum, Jacob, Zhang, Fan, Chou, Katherine, Hassidim, Avinatan, Gokturk, Burak, Vahdat, Amin, Kohli, Pushmeet, Matias, Yossi, Carroll, Andrew, Kulkarni, Kavita, Tomasev, Nenad, Guan, Yuan, Dhillon, Vikram, Vaishnav, Eeshit Dhaval, Lee, Byron, Costa, Tiago R D, Penadés, José R, Peltz, Gary, Xu, Yunhan, Pawlosky, Annalisa, Karthikesalingam, Alan, Natarajan, Vivek

arXiv.org Artificial Intelligence

Scientific discovery relies on scientists generating novel hypotheses that undergo rigorous experimental validation. To augment this process, we introduce an AI co-scientist, a multi-agent system built on Gemini 2.0. The AI co-scientist is intended to help uncover new, original knowledge and to formulate demonstrably novel research hypotheses and proposals, building upon prior evidence and aligned to scientist-provided research objectives and guidance. The system's design incorporates a generate, debate, and evolve approach to hypothesis generation, inspired by the scientific method and accelerated by scaling test-time compute. Key contributions include: (1) a multi-agent architecture with an asynchronous task execution framework for flexible compute scaling; (2) a tournament evolution process for self-improving hypotheses generation. Automated evaluations show continued benefits of test-time compute, improving hypothesis quality. While general purpose, we focus development and validation in three biomedical areas: drug repurposing, novel target discovery, and explaining mechanisms of bacterial evolution and anti-microbial resistance. For drug repurposing, the system proposes candidates with promising validation findings, including candidates for acute myeloid leukemia that show tumor inhibition in vitro at clinically applicable concentrations. For novel target discovery, the AI co-scientist proposed new epigenetic targets for liver fibrosis, validated by anti-fibrotic activity and liver cell regeneration in human hepatic organoids. Finally, the AI co-scientist recapitulated unpublished experimental results via a parallel in silico discovery of a novel gene transfer mechanism in bacterial evolution. These results, detailed in separate, co-timed reports, demonstrate the potential to augment biomedical and scientific discovery and usher an era of AI empowered scientists.


Lifespan tree of brain anatomy: diagnostic values for motor and cognitive neurodegenerative diseases

Coupé, Pierrick, Mansencal, Boris, Manjón, José V., Péran, Patrice, Meissner, Wassilios G., Tourdias, Thomas, Planche, Vincent

arXiv.org Artificial Intelligence

The differential diagnosis of neurodegenerative diseases, characterized by overlapping symptoms, may be challenging. Brain imaging coupled with artificial intelligence has been previously proposed for diagnostic support, but most of these methods have been trained to discriminate only isolated diseases from controls. Here, we develop a novel machine learning framework, named lifespan tree of brain anatomy, dedicated to the differential diagnosis between multiple diseases simultaneously. It integrates the modeling of volume changes for 124 brain structures during the lifespan with non-linear dimensionality reduction and synthetic sampling techniques to create easily interpretable representations of brain anatomy over the course of disease progression. As clinically relevant proof- of-concept applications, we constructed a cognitive lifespan tree of brain anatomy for the differential diagnosis of six causes of neurodegenerative dementia and a motor lifespan tree of brain anatomy for the differential diagnosis of four causes of parkinsonism using 37594 MRI as a training dataset. This original approach enhanced significantly the efficiency of differential diagnosis in the external validation cohort of 1754 cases, outperforming existing state-of-the art machine learning techniques. Lifespan tree holds promise as a valuable tool for differential diagnostic in relevant clinical conditions, especially for diseases still lacking effective biological markers.


Integrating Generative Artificial Intelligence in ADRD: A Framework for Streamlining Diagnosis and Care in Neurodegenerative Diseases

Breithaupt, Andrew G., Tang, Alice, Miller, Bruce L., Pinheiro-Chagas, Pedro

arXiv.org Artificial Intelligence

Healthcare systems are struggling to meet the growing demand for neurological care, with challenges particularly acute in Alzheimer's disease and related dementias (ADRD). While artificial intelligence research has often focused on identifying patterns beyond human perception, implementing such predictive capabilities remains challenging as clinicians cannot readily verify insights they cannot themselves detect. We propose that large language models (LLMs) offer more immediately practical applications by enhancing clinicians' capabilities in three critical areas: comprehensive data collection, interpretation of complex clinical information, and timely application of relevant medical knowledge. These challenges stem from limited time for proper diagnosis, growing data complexity, and an overwhelming volume of medical literature that exceeds any clinician's capacity to fully master. We present a framework for responsible AI integration that leverages LLMs' ability to communicate effectively with both patients and providers while maintaining human oversight. This approach prioritizes standardized, high-quality data collection to enable a system that learns from every patient encounter while incorporating the latest clinical evidence, continuously improving care delivery. We begin to address implementation challenges and initiate important discussions around ethical considerations and governance needs. While developed for ADRD, this roadmap provides principles for responsible AI integration across neurology and other medical specialties, with potential to improve diagnostic accuracy, reduce care disparities, and advance clinical knowledge through a learning healthcare system.


Identifying latent disease factors differently expressed in patient subgroups using group factor analysis

Ferreira, Fabio S., Ashburner, John, Bouzigues, Arabella, Suksasilp, Chatrin, Russell, Lucy L., Foster, Phoebe H., Ferry-Bolder, Eve, van Swieten, John C., Jiskoot, Lize C., Seelaar, Harro, Sanchez-Valle, Raquel, Laforce, Robert, Graff, Caroline, Galimberti, Daniela, Vandenberghe, Rik, de Mendonca, Alexandre, Tiraboschi, Pietro, Santana, Isabel, Gerhard, Alexander, Levin, Johannes, Sorbi, Sandro, Otto, Markus, Pasquier, Florence, Ducharme, Simon, Butler, Chris R., Ber, Isabelle Le, Finger, Elizabeth, Tartaglia, Maria C., Masellis, Mario, Rowe, James B., Synofzik, Matthis, Moreno, Fermin, Borroni, Barbara, Kaski, Samuel, Rohrer, Jonathan D., Mourao-Miranda, Janaina

arXiv.org Machine Learning

The heterogeneity of neurological and mental health disorders has been a key confound to disease understanding, treatment development and outcome prediction, as patient populations are thought to include multiple disease pathways that selectively respond to treatment (Kapur et al., 2012). These challenges are reflected in poor treatment outcomes; for instance, in depression, approximately only 40% of patients remit after first-line antidepressant treatment or psychotherapy (Amick et al., 2015; Cuijpers et al., 2014; Fava and Davidson, 1996; Trivedi et al., 2006). Diagnostic categories in psychiatry have historically been defined based on signs and symptoms, prioritising diagnostic agreement between clinicians, rather than underlying biological mechanisms (Freedman et al., 2013; Robins and Guze, 1970). Resultingly, the usefulness of supervised machine learning methods as diagnostic tools for mental health disorders (i.e., classifying patients vs. healthy controls) is questionable, as they may simply inherit the flaws of current diagnostic categories. Additional challenges in neurological and mental health disorders are comorbidity (i.e., individuals with one disorder often develop another disorder during their lifespan) and that different disorders can share similar symptoms (Kessler et al., 2005). To address the limitations of current diagnostic categories in psychiatry, the National Institute of Mental Health launched the Research Domain Criteria framework (RDoC) in 2009 (https://www.nimh.nih.gov/research/ 2 research-funded-by-nimh/rdoc) as an attempt to move beyond diagnostic categories and ground psychiatry within neurobiological constructs that combine multiple levels of measures or sources of information (Insel et al., 2010). Multivariate methods, such as Canonical Correlation Analysis (CCA) and related methods, that do not rely on the diagnostic categories, have been widely used to uncover latent disease dimensions capturing associations between brain imaging and non-imaging data (e.g., self-report questionnaires, cognitive tests and genetics). The identified latent dimensions provide information on how a set of non-imaging features (e.g.


Eye-tracking in Mixed Reality for Diagnosis of Neurodegenerative Diseases

Daniol, Mateusz, Hemmerling, Daria, Sikora, Jakub, Jemiolo, Pawel, Wodzinski, Marek, Wojcik-Pedziwiatr, Magdalena

arXiv.org Artificial Intelligence

Parkinson's disease ranks as the second most prevalent neurodegenerative disorder globally. This research aims to develop a system leveraging Mixed Reality capabilities for tracking and assessing eye movements. In this paper, we present a medical scenario and outline the development of an application designed to capture eye-tracking signals through Mixed Reality technology for the evaluation of neurodegenerative diseases. Additionally, we introduce a pipeline for extracting clinically relevant features from eye-gaze analysis, describing the capabilities of the proposed system from a medical perspective. The study involved a cohort of healthy control individuals and patients suffering from Parkinson's disease, showcasing the feasibility and potential of the proposed technology for non-intrusive monitoring of eye movement patterns for the diagnosis of neurodegenerative diseases. Clinical relevance - Developing a non-invasive biomarker for Parkinson's disease is urgently needed to accurately detect the disease's onset. This would allow for the timely introduction of neuroprotective treatment at the earliest stage and enable the continuous monitoring of intervention outcomes. The ability to detect subtle changes in eye movements allows for early diagnosis, offering a critical window for intervention before more pronounced symptoms emerge. Eye tracking provides objective and quantifiable biomarkers, ensuring reliable assessments of disease progression and cognitive function. The eye gaze analysis using Mixed Reality glasses is wireless, facilitating convenient assessments in both home and hospital settings. The approach offers the advantage of utilizing hardware that requires no additional specialized attachments, enabling examinations through personal eyewear.